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Non-coding regulatory variation drives complex traits, domestication, and evolutionary adaptation, yet the sheep genome lacks high-resolution functional annotation. Here we present SheepEpimap, a multi-tissue regulatory atlas harmonizing 516 CUT&Tag histone mo…
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2026
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2026
置信度 0.74
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Eggplant ( Solanum melongena L.) displays extensive fruit color diversity, in which chlorophyll-related pigmentation contributes to both external appearance and market value. Previous genetic studies identified SmAPRR2 and SmGLK2 as major candidate genes contr…
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2026
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2026
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2026
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Abstract Background Genomics and transcriptomics workflows require coordinated use of multiple specialized tools, creating technical barriers for many domain scientists. Large language models (LLMs) have shown promise for supporting bioinformatics tasks, but s…
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2026
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2025
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2026
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RNA sequencing (RNA-Seq) is increasingly used alongside exome and genome sequencing to identify causal variants underlying rare Mendelian disorders. We present short-read RNA-Seq data from 5,412 individuals with a diverse range of rare disorders recruited to G…
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2026
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2026
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2026
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2026
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2026
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2026
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2026
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2026
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2026
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2025
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2026
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2025
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2026
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RNA sequencing (RNA-seq) provides a powerful complement to DNA sequencing for uncovering pathogenic defects affecting gene expression and splicing in individuals with genetically undiagnosed rare disorders. However, as large rare disease consortia adopt RNA-se…
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2026
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2026
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Background The detrimental impact of alcohol consumption on the gut microbiome is well-established. However, less is known about how alcohol exposure during pregnancy affects the maternal gut and vaginal microbiota, or how these microbial changes relate to sub…
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2026
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2026
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2026
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2026
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2026
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2026
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Single-cell RNA sequencing (scRNA-seq) cell annotation techniques rely on the matching of known defining marker genes to a given cell population. However, these methods may lack robustness to dynamic fluctuations in cell marker expression between patients, sam…
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2026
置信度 0.74
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Healthcare systems must balance rising costs with the delivery of effective care, yet the factors underlying large inter-individual differences in healthcare expenditure remain incompletely understood. Here we examine how genome-wide genetic variation contribu…
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2026
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2026
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2026
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Barley leaf rust disease, caused by Puccinia hordei , leads to substantial yield losses and diminished malting quality of barley across temperate growing regions worldwide. To address the paucity of high-resolution genomic resources for this pathogen, we gener…
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2026
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2026
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2025
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2025
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2026
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2026
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2026
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2025
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2026
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2025
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2026
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2026
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2025
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Background A range of rare chromosomal micro-deletions or -duplications (Copy Number Variants - CNVs) are associated with high risk of neurodevelopmental and mental health conditions (ND-CNVs). There is great individual variability in outcomes, but we lack ins…
preprints
2026
置信度 0.74
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To what extent conserved developmental programs specify homologous cell types is a central question in biology. Here, we address this by focusing on reconstructing monoaminergic neuron development in Drosophila melanogaster embryo using time- resolved single-c…
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2025
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2026
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Mood and anxiety disorders emerge predominantly in adolescence, yet they are usually identified only once symptoms have consolidated, when intervention can only be reactive. A marker that registers the loss of healthy brain function before symptoms crystallise…
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2026
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2025
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2025
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The generation of species trees from genomic data is an important step in understanding evolutionary relationships across the tree of life. With the increasing availability of genomic data, species tree inference methods which can easily and rapidly produce ac…
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2026
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2026
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2025
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2026
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2026
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2025
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2026
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2026
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2025
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ABSTRACT Major depressive disorder (MDD) is a complex psychiatric disorder, characterized by a range of mood, cognitive, and neurovegetative symptoms. Current diagnostic criteria treat opposite symptom directions as equivalent; weight gain or loss, and increas…
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2026
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2025
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2026
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2025
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2025
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2026
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ABSTRACT Hereditary hearing loss is highly genetically heterogeneous, with emerging overlap between genes implicated in early-onset and age-related hearing loss. We report a consanguineous family with autosomal recessive, non-syndromic hearing loss in which th…
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2026
置信度 0.74
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2026
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2025
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2025
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2026
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2025
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We investigated host-genetic TB susceptibility by expression quantitative trait loci (eQTL) analysis of the tuberculin skin test (TST) as a standardised challenge model of human in vivo TB immunology. Paired genotyping with 415 RNA-sequencing profiles from day…
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2026
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2026
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2026
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2025
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2026
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ABSTRACT Identifying nematodes to the species level is known to be complicated due to their morphological plasticity and limited number of taxonomically important characters. This is especially apparent in the genus Panagrolaimus , which comprises many cryptic…
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2026
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2025
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2025
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2025
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2026
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2025
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2026
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2026
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Bone marrow mononuclear cells (BMMCs) are a heterogeneous pool of hematopoietic progenitors and mature immune cells that collectively sustain hematopoiesis and coordinate immune responses. The bone marrow serves not only as the primary site for blood cell prod…
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2025
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2026
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2026
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Escherichia coli sequence type (ST) 131 is the most widely studied genetic lineage of the species to date, originally identified in the early 2000s as an increasingly common cause of human urinary tract and bloodstream infections worldwide. This lineage is sub…
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2025
置信度 0.74
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ABSTRACT Philaenus spumarius (L.), the meadow spittlebug, is the principal European vector of Xylella fastidiosa . This xylem-feeding insect has a broad host range, ecological plasticity, and mobility, making it an efficient vector across diverse landscapes. Y…
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2025
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2026
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2025
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2025
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2025
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2026
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2026
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ABSTRACT Three-dimensional (3D) organotypic cultures recapitulate key structural features of oral tumours and provide controlled, ethical, and reproducible research platforms. However, their ability to faithfully recapitulate in vivo tissue composition and the…
preprints
2026
置信度 0.74
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With the dramatic take-up of spatially resolved transcriptomics biotechnologies, performing spatially-aware analysis of the resulting data is crucial to maximise advances in biological understanding. Dimensionality reduction is a first step in almost any analy…
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2025
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2025
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