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Data-driven approaches are transforming healthcare, yet acquisition of comprehensive datasets is hindered by high costs, privacy regulations, and ethical concerns. To address these challenges, synthetic data, artificially generated datasets that mimic the stat…
preprints
2025
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2025
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preprints
2026
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2025
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2026
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Predicting how DNA sequence specifies gene expression remains a core challenge across regulatory genomics. Most predictive assays and models depend on native genomic DNA, constraining the full biochemical engineering space for assessing and designing new seque…
preprints
2025
置信度 0.74
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2025
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2026
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Synthetic nanobodies—also called sybodies—have proven valuable for stabilizing conformations of purified proteins, advancing structural and functional studies for example of transmembrane protein complexes. However, their utility in modulating protein function…
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2025
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2025
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2025
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Accurately modeling biomolecular interactions is a central challenge in modern biology. While recent advances, such as AlphaFold3 and Boltz-1, have substantially improved our ability to predict biomolecular complex structures, these models still fall short in …
preprints
2025
置信度 0.74
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Abstract The engineering of genetic circuits to perform predefined computations is central to synthetic biology, enabling living cells with new functionalities applicable across various domains. However, these circuits are often specifically tailored to partic…
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Juan Rico, Pablo Japón, Luis Rubio, Ángel Goñi-Moreno
2024
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preprints
2026
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2025
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2026
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2024
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2024
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A significant advancement in synthetic biology is the development of synthetic gene circuits with predictive Boolean logic. However, there is no universally accepted or applied statistical test to analyze the performance of these circuits. Many basic statistic…
preprints
Gina Partipilo, Sarah M Coleman, Yang Gao, Ismar E Miniel Mahfoud 等
2024
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Abstract The discovery of novel odorant molecules is key for the fragrance and flavor industries, yet efficiently navigating the vast chemical space to identify structures with desirable olfactory properties remains a significant challenge. Generative artifici…
preprints
2026
置信度 0.74
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Engineering cell fate is fundamental for optimizing stem cell-based therapies aimed at replacing cells in patients suffering from trauma or disease. By timely administering molecular regulators - such as transcription factors, RNAs, or small molecules - in a p…
preprints
Frank Britto Bisso, Giulia Giordano, Christian Cuba Samaniego
2024
置信度 0.74
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The tight regulation of the integrin family of extracellular matrix (ECM) receptors is essential for the coordination of most cellular processes. Talin regulates integrin function by binding to the cytoplasmic tail of the integrin beta subunit. Two integrin-bi…
preprints
2026
置信度 0.74
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2025
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2024
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2024
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2026
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2025
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2024
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2025
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2026
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2024
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2024
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2026
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2025
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2026
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2025
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2025
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Abstract Transient plant enzyme complexes formed via protein-protein interactions (PPIs) play crucial regulatory roles in secondary metabolism. Complexes assembled on cytochrome P450s (CYPs) are challenging to characterize metabolically due to difficulties in …
preprints
Chang Liu, Jianing Han, Sijin Li
2024
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2025
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2024
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2025
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2024
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The expression of genes and engineered circuits can deeply vary when inserted into different genomic loci. This unpredictable performance of expression, termed context sensitivity, complicates strain development. Although the causes and mechanisms of context s…
preprints
2024
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preprints
2025
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2025
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2024
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2024
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2024
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Abstract Vesicular stomatitis virus (VSV) is a prototype RNA virus that has been instrumental in advancing our understanding of viral molecular biology and has applications in vaccine development, cancer therapy, antiviral screening, and more. Current VSV geno…
preprints
Chad M. Moles, Rupsa Basu, Peter Weijmarshausen, Brenda Ho 等
2024
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preprints
2024
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Abstract Maintaining engineered cell populations’ genetic stability is a key challenge in synthetic biology. Synthetic genetic constructs compete with a host cell’s native genes for expression resources, burdening the cell and impairing its growth. This create…
preprints
Kirill Sechkar, Harrison Steel
2024
置信度 0.74
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Summary Genome stability is essential for cellular viability yet constantly threatened by endogenous and exogenous DNA-damaging agents. Among these, DNA double-strand breaks (DSBs) are particularly harmful and in S/G2 phases are faithfully repaired through hom…
preprints
2026
置信度 0.74
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preprints
2024
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preprints
2024
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Post-transcriptional control systems offer new avenues to design synthetic circuits that offer reduced burden and less synthetic regulatory components compared to transcriptionally based tools. Herein, we repurpose a newly identified post-transcriptional inter…
preprints
2024
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2024
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2024
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Summary Associative conditioning is a fundamental learning paradigm that links salient stimuli to appropriate behavior. The vinegar fly is an important memory model that can associate odors with rewarding or punishing reinforcement stimuli via distinct sets of…
preprints
2025
置信度 0.74
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ABSTRACT Background About half of the women experience insomnia during the perimenopause, a transitional phase characterised by fluctuations in sex hormones. Insomnia is known to increase the risk of other mental health problems. Therefore, addressing insomnia…
preprints
2026
置信度 0.74
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Abstract Foundational techniques in molecular biology—such as cloning genes, tagging biomolecules for purification or identification, and overexpressing recombinant proteins—rely on introducing non-native or synthetic DNA sequences into organisms. These sequen…
preprints
Cameron T. Roots, Jeffrey E. Barrick
2024
置信度 0.74
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C-type lectins (CTLs) play key roles in innate immunity and microbial carbohydrate recognition. In the disease vector mosquito Aedes aegypti , the CTLD-S family comprises 34 soluble CTLs whose members are implicated in flavivirus dissemination and microbial ho…
preprints
2026
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preprints
2024
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Tractography currently relies almost exclusively on diffusion data and seed maps, which alone remain insufficient for anatomically accurate fiber reconstruction. During brain development, white-matter fibers elongate alongside cortical folding, suggesting a cl…
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2025
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2024
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2024
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2024
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2024
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2024
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2024
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2024
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2024
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2026
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2025
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With the dramatic take-up of spatially resolved transcriptomics biotechnologies, performing spatially-aware analysis of the resulting data is crucial to maximise advances in biological understanding. Dimensionality reduction is a first step in almost any analy…
preprints
2025
置信度 0.74
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2025
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2024
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2024
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2026
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2026
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2025
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2024
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Quantifying the abundance and activity of bacteria within populations and communities is fundamental to systems microbiology and microbiome research. Yet direct microscopic cell counting remains low-throughput, labor-intensive, and prone to user variability, l…
preprints
2026
置信度 0.74
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2025
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2024
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2024
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2025
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2024
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2026
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ABSTRACT How piRNA-mediated genome defense achieves specificity against transposons while sampling a complex transcriptome has remained unresolved. Here we show that piRNA biogenesis operates through pervasive, non-specific sampling of cytoplasmic RNAs, with s…
preprints
2026
置信度 0.74
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We developed a haplotype-resolved, chromosome-scale genome assembly of the Urochloa humidicola (Rendle) Morrone & Zuloaga cultivar Tully, an apomictic C4 forage grass cultivated in the tropics worldwide. We assembled a 4.1 Gb genome into 48 chromosomes (2n = 8…
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2025
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preprints
2024
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AP-1 transcription factors are a network of cellular regulators, that combine in different dimer pairs to control a range of pathways involved in differentiation, growth, and cell death. They dimerise via leucine zipper coiled-coil domains, that are preceded b…
preprints
2024
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2024
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2024
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Abstract Synthetic biology aims to engineer biological systems with specified functions. This requires navigating an extensive design space, which is challenging to achieve with wet lab experiments alone. To expedite the design process, mathematical modelling …
preprints
Michal Kobiela, Diego A. Oyarzún, Michael U. Gutmann
2024
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2025
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2024
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2024
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2025
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2026
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