生物计算 · 全部实体（第 1 / 95 页）

本页收录第 1–100 条，共 9416 条 · 返回 生物计算 首页

• Unique Down to Our Microbes—Assessment of an Inquiry-Based Metagenomics Activity
  openalex 2017 置信度 0.70 Genetics, Bioinformatics, and Biomedical ResearchScientific Computing and Data ManagementGenomics and Phylogenetic Studies
• ClipKIT: A multiple sequence alignment trimming software for accurate phylogenomic inference
  openalex 2020 置信度 0.70 Genomics and Phylogenetic StudiesGenetic diversity and population structureEvolution and Paleontology Studies
• The nf-core framework for community-curated bioinformatics pipelines
  openalex 2020 置信度 0.70 Scientific Computing and Data ManagementGenetics, Bioinformatics, and Biomedical ResearchResearch Data Management Practices
• Porechop_ABI: discovering unknown adapters in Oxford Nanopore Technology sequencing reads for downstream trimming
  openalex 2022 置信度 0.70 Genomics and Phylogenetic StudiesGene expression and cancer classificationGenomics and Rare Diseases
• TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data
  openalex 2020 置信度 0.70 Genomics and Phylogenetic StudiesBioinformatics and Genomic NetworksAdvanced Proteomics Techniques and Applications
• CellProfiler Analyst: interactive data exploration, analysis and classification of large biological image sets
  openalex 2016 置信度 0.70 Cell Image Analysis TechniquesSingle-cell and spatial transcriptomicsDigital Imaging for Blood Diseases
• Resolving cellular dynamics using single-cell temporal transcriptomics
  openalex 2024 置信度 0.70 Single-cell and spatial transcriptomicsGene Regulatory Network AnalysisCell Image Analysis Techniques
• Large-scale monoclonal antibody purification by continuous chromatography, from process design to scale-up
  openalex 2015 置信度 0.70 Protein purification and stabilityMonoclonal and Polyclonal Antibodies ResearchViral Infectious Diseases and Gene Expression in Insects
• Multi-agent simulated annealing algorithm with parallel adaptive multiple sampling for protein structure prediction in AB off-lattice model
  openalex 2017 置信度 0.70 Machine Learning in BioinformaticsGenomics and Phylogenetic StudiesGene expression and cancer classification
• A comparison of single-cell trajectory inference methods
  openalex 2019 置信度 0.70 Single-cell and spatial transcriptomicsGene expression and cancer classificationGenomics and Chromatin Dynamics
• Biopython
  openalex 2000 置信度 0.70 Genetics, Bioinformatics, and Biomedical ResearchCell Image Analysis Techniques
• Digitalized organoids: integrated pipeline for high-speed 3D analysis of organoid structures using multilevel segmentation and cellular topology
  openalex 2025 置信度 0.70 Cell Image Analysis Techniques3D Printing in Biomedical ResearchCancer Cells and Metastasis
• Computing in mammalian cells with nucleic acid strand exchange
  openalex 2015 置信度 0.70 Advanced biosensing and bioanalysis techniquesRNA Interference and Gene DeliveryDNA and Nucleic Acid Chemistry
• Principal Component Analysis: A Method for Determining the Essential Dynamics of Proteins
  openalex 2013 置信度 0.70 Protein Structure and DynamicsMolecular spectroscopy and chiralityRNA and protein synthesis mechanisms
• Finding recurrent RNA structural networks with fast maximal common subgraphs of edge-colored graphs
  openalex 2021 置信度 0.70 RNA and protein synthesis mechanismsRNA modifications and cancerGenomics and Phylogenetic Studies
• MultiVI: deep generative model for the integration of multi-modal data
  openalex 2021 置信度 0.70 Single-cell and spatial transcriptomicsCell Image Analysis TechniquesGenomics and Chromatin Dynamics
• COBRApy: COnstraints-Based Reconstruction and Analysis for Python
  openalex 2013 置信度 0.70 Microbial Metabolic Engineering and BioproductionBioinformatics and Genomic NetworksGene Regulatory Network Analysis
• Image-based cell profiling enhancement via data cleaning methods
  openalex 2022 置信度 0.70 Cell Image Analysis TechniquesImage Processing Techniques and ApplicationsAdvanced Fluorescence Microscopy Techniques
• Primer3—new capabilities and interfaces
  openalex 2012 置信度 0.70 Software Testing and Debugging Techniques
• Reducing the computational load of energy evaluations for protein folding
  openalex 2004 置信度 0.70 Protein Structure and DynamicsAlgorithms and Data CompressionGenomics and Chromatin Dynamics
• Cellpose: a generalist algorithm for cellular segmentation
  openalex 2020 置信度 0.70 Cell Image Analysis TechniquesImage Processing Techniques and ApplicationsSingle-cell and spatial transcriptomics
• A simple method to control over-alignment in the MAFFT multiple sequence alignment program
  openalex 2016 置信度 0.70 Genomics and Phylogenetic StudiesProtein Structure and DynamicsEnzyme Structure and Function
• Docking of protein molecular surfaces with evolutionary trace analysis
  openalex 2007 置信度 0.70 RNA and protein synthesis mechanismsProtein Structure and DynamicsMachine Learning in Bioinformatics
• Comparison of Approaches for Determining Bioactivity Hits from High-Dimensional Profiling Data
  openalex 2020 置信度 0.70 Cell Image Analysis TechniquesComputational Drug Discovery MethodsViral Infectious Diseases and Gene Expression in Insects
• MetaboAnalyst 5.0: narrowing the gap between raw spectra and functional insights
  openalex 2021 置信度 0.70 Metabolomics and Mass Spectrometry StudiesGut microbiota and healthBioinformatics and Genomic Networks
• Understanding network concepts in modules
  openalex 2007 置信度 0.70 Bioinformatics and Genomic NetworksComplex Network Analysis TechniquesMental Health Research Topics
• Benchmark problems for dynamic modeling of intracellular processes
  openalex 2019 置信度 0.70 Gene Regulatory Network AnalysisMicrobial Metabolic Engineering and BioproductionGene expression and cancer classification
• Bayesian cell therapy process optimization
  openalex 2024 置信度 0.70 Advanced Multi-Objective Optimization AlgorithmsOptimal Experimental Design MethodsViral Infectious Diseases and Gene Expression in Insects
• Identification of common molecular subsequences
  openalex 1981 置信度 0.70 Quantum Computing Algorithms and ArchitectureAlgorithms and Data CompressionError Correcting Code Techniques
• VisANT: data-integrating visual framework for biological networks and modules
  openalex 2005 置信度 0.70 Bioinformatics and Genomic NetworksGene Regulatory Network AnalysisMicrobial Metabolic Engineering and Bioproduction
• Complex heatmap visualization
  openalex 2022 置信度 0.70 Gene expression and cancer classificationBioinformatics and Genomic NetworksGenetic Mapping and Diversity in Plants and Animals
• The tYNA platform for comparative interactomics: a web tool for managing, comparing and mining multiple networks
  openalex 2006 置信度 0.70 Bioinformatics and Genomic NetworksCell Image Analysis TechniquesSingle-cell and spatial transcriptomics
• FLASH: fast length adjustment of short reads to improve genome assemblies
  openalex 2011 置信度 0.70 Genomics and Phylogenetic StudiesGenome Rearrangement AlgorithmsBacteriophages and microbial interactions
• Basic local alignment search tool
  openalex 1990 置信度 0.70 Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsGenomics and Chromatin Dynamics
• KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
  openalex 2016 置信度 0.70 Genomics and Phylogenetic StudiesBacteriophages and microbial interactionsGenomics and Rare Diseases
• ADEMO/D: An adaptive differential evolution for protein structure prediction problem
  openalex 2016 置信度 0.70 Advanced Multi-Objective Optimization AlgorithmsMetaheuristic Optimization Algorithms ResearchEvolutionary Algorithms and Applications
• Cobolt: integrative analysis of multimodal single-cell sequencing data
  openalex 2021 置信度 0.70 Single-cell and spatial transcriptomicsCancer Genomics and DiagnosticsRNA modifications and cancer
• The Quantified Self: Fundamental Disruption in Big Data Science and Biological Discovery
  openalex 2013 置信度 0.70 Innovative Human-Technology InteractionData Visualization and AnalyticsMental Health Research Topics
• Multi-Omics Approaches and Resources for Systems-Level Gene Function Prediction in the Plant Kingdom
  openalex 2022 置信度 0.70 Bioinformatics and Genomic NetworksGenomics and Phylogenetic StudiesMicrobial Metabolic Engineering and Bioproduction
• Applications in image-based profiling of perturbations
  openalex 2016 置信度 0.70 Cell Image Analysis TechniquesGenetics, Bioinformatics, and Biomedical ResearchAdvanced Fluorescence Microscopy Techniques
• Building synthetic gene circuits from combinatorial libraries: screening and selection strategies
  openalex 2013 置信度 0.70 CRISPR and Genetic EngineeringRNA and protein synthesis mechanismsMonoclonal and Polyclonal Antibodies Research
• Identification of hot-spot residues in protein-protein interactions by computational docking
  openalex 2008 置信度 0.70 Protein Structure and DynamicsHeat shock proteins research14-3-3 protein interactions
• MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
  openalex 2013 置信度 0.70 Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsBacterial Genetics and Biotechnology
• Machine and deep learning meet genome-scale metabolic modeling
  openalex 2019 置信度 0.70 Microbial Metabolic Engineering and BioproductionBioinformatics and Genomic NetworksGene Regulatory Network Analysis
• Quality control and analytical methods for baculovirus-based products
  openalex 2011 置信度 0.70 Viral Infectious Diseases and Gene Expression in InsectsProtein purification and stability3D Printing in Biomedical Research
• SwissTargetPrediction: updated data and new features for efficient prediction of protein targets of small molecules
  openalex 2019 置信度 0.70 Computational Drug Discovery MethodsMicrobial Natural Products and BiosynthesisProtein Structure and Dynamics
• Brieflow: An Integrated Computational Pipeline for High-Throughput Analysis of Optical Pooled Screening Data
  openalex 2025 置信度 0.70 Cell Image Analysis TechniquesSingle-cell and spatial transcriptomicsGenetics, Bioinformatics, and Biomedical Research
• Sequencing DNA with nanopores: Troubles and biases
  openalex 2021 置信度 0.70 Genomics and Phylogenetic StudiesMolecular Biology Techniques and ApplicationsRNA and protein synthesis mechanisms
• Speed up differential evolution for computationally expensive protein structure prediction problems
  openalex 2019 置信度 0.70 Evolutionary Algorithms and ApplicationsMetaheuristic Optimization Algorithms ResearchAdvanced Multi-Objective Optimization Algorithms
• Evaluating batch correction methods for image-based cell profiling
  openalex 2024 置信度 0.70 Single-cell and spatial transcriptomicsCell Image Analysis TechniquesMicrofluidic and Bio-sensing Technologies
• Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture
  openalex 2022 置信度 0.70 Genomics and Chromatin DynamicsChromosomal and Genetic VariationsRNA and protein synthesis mechanisms
• SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modeling
  openalex 1997 置信度 0.70 Protein Structure and DynamicsEnzyme Structure and FunctionBacterial Genetics and Biotechnology
• Incorporating Pathway Information into Feature Selection towards Better Performed Gene Signatures
  openalex 2019 置信度 0.70 Bioinformatics and Genomic NetworksGene expression and cancer classificationComputational Drug Discovery Methods
• Unraveling hot spots in binding interfaces: progress and challenges
  openalex 2002 置信度 0.70 Protein Structure and DynamicsComputational Drug Discovery MethodsMass Spectrometry Techniques and Applications
• Lymphocyte expansion in bioreactors: upgrading adoptive cell therapy
  openalex 2021 置信度 0.70 CAR-T cell therapy researchPluripotent Stem Cells ResearchHematopoietic Stem Cell Transplantation
• Bio-inspired control of automated stem cell production
  openalex 2020 置信度 0.70 3D Printing in Biomedical ResearchDigital Transformation in IndustryBiomedical and Engineering Education
• Improvements to the Percolator Algorithm for Peptide Identification from Shotgun Proteomics Data Sets
  openalex 2009 置信度 0.70 Advanced Proteomics Techniques and ApplicationsMachine Learning in BioinformaticsMass Spectrometry Techniques and Applications
• AnnoPRO: a strategy for protein function annotation based on multi-scale protein representation and a hybrid deep learning of dual-path encoding
  openalex 2024 置信度 0.70 Machine Learning in BioinformaticsRNA and protein synthesis mechanismsGenomics and Phylogenetic Studies
• A Universally Unique IDentifier (UUID) URN Namespace
  openalex 2005 置信度 0.70 Distributed and Parallel Computing SystemsAdvanced Data Storage TechnologiesDistributed systems and fault tolerance
• Fast gene set enrichment analysis
  openalex 2016 置信度 0.70 Bioinformatics and Genomic NetworksGene expression and cancer classificationGene Regulatory Network Analysis
• Advances in enhanced biological phosphorus removal: From micro to macro scale
  openalex 2007 置信度 0.70 Wastewater Treatment and Nitrogen RemovalPhosphorus and nutrient managementConstructed Wetlands for Wastewater Treatment
• Approximately independent linkage disequilibrium blocks in human populations
  openalex 2015 置信度 0.70 RNA modifications and cancerGenetic Associations and EpidemiologyRNA Research and Splicing
• Modern Sensor Tools and Techniques for Monitoring, Controlling, and Improving Cell Culture Processes
  openalex 2022 置信度 0.70 Viral Infectious Diseases and Gene Expression in InsectsProtein purification and stabilitythermodynamics and calorimetric analyses
• ZDOCK server: interactive docking prediction of protein–protein complexes and symmetric multimers
  openalex 2014 置信度 0.70 vaccines and immunoinformatics approachesProtein Structure and DynamicsBioinformatics and Genomic Networks
• Functional phenomics: an emerging field integrating high-throughput phenotyping, physiology, and bioinformatics
  openalex 2018 置信度 0.70 Genetic Mapping and Diversity in Plants and AnimalsRemote Sensing in AgriculturePlant and animal studies
• clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
  openalex 2012 置信度 0.70 Bioinformatics and Genomic NetworksGene expression and cancer classificationMachine Learning in Bioinformatics
• The SWISS-MODEL Repository and associated resources
  openalex 2008 置信度 0.70 Enzyme Structure and FunctionProtein Structure and DynamicsGenomics and Phylogenetic Studies
• Predicting the structure of large protein complexes using AlphaFold and Monte Carlo tree search
  openalex 2022 置信度 0.70 Protein Structure and DynamicsEnzyme Structure and FunctionRNA and protein synthesis mechanisms
• Methods for the detection and assembly of novel sequence in high-throughput sequencing data
  openalex 2015 置信度 0.70 Genomics and Phylogenetic StudiesGenomics and Rare DiseasesBiomedical Text Mining and Ontologies
• The BRENDA enzyme information system–From a database to an expert system
  openalex 2017 置信度 0.70 Microbial Metabolic Engineering and BioproductionEnzyme Structure and FunctionAdvanced Proteomics Techniques and Applications
• The future of phenotypic drug discovery
  openalex 2021 置信度 0.70 Cell Image Analysis TechniquesComputational Drug Discovery MethodsSingle-cell and spatial transcriptomics
• Class-Guided Image-to-Image Diffusion: Cell Painting from Brightfield Images with Class Labels
  openalex 2023 置信度 0.70 Cell Image Analysis TechniquesImage Processing Techniques and ApplicationsSingle-cell and spatial transcriptomics
• Noise and Epigenetic Inheritance of Single-Cell Division Times Influence Population Fitness
  openalex 2016 置信度 0.70 Gene Regulatory Network AnalysisSingle-cell and spatial transcriptomicsEvolution and Genetic Dynamics
• Data-analysis strategies for image-based cell profiling
  openalex 2017 置信度 0.70 Cell Image Analysis TechniquesSingle-cell and spatial transcriptomicsImage Processing Techniques and Applications
• Correlation Imputation for Single-Cell RNA-seq
  openalex 2022 置信度 0.70 Single-cell and spatial transcriptomicsGene expression and cancer classificationStatistical Methods and Inference
• ModelFinder: fast model selection for accurate phylogenetic estimates
  openalex 2017 置信度 0.70 Evolution and Paleontology StudiesGenomics and Phylogenetic StudiesGenetic diversity and population structure
• A systems-theoretic approach to hazard identification of marine systems with dynamic autonomy
  openalex 2020 置信度 0.70 Risk and Safety AnalysisOccupational Health and Safety ResearchMaritime Navigation and Safety
• Protein structure alignment
  openalex 1989 置信度 0.70 Protein Structure and DynamicsEnzyme Structure and FunctionRNA and protein synthesis mechanisms
• Performance and Its Limits in Rigid Body Protein-Protein Docking
  openalex 2020 置信度 0.70 Protein Structure and DynamicsTransgenic Plants and ApplicationsProtein purification and stability
• ChromHMM: automating chromatin-state discovery and characterization
  openalex 2012 置信度 0.70 Genomics and Chromatin DynamicsGene expression and cancer classificationBioinformatics and Genomic Networks
• Kinetic modeling: A tool for temperature shift and feeding optimization in cell culture process development
  openalex 2022 置信度 0.70 Viral Infectious Diseases and Gene Expression in InsectsProtein purification and stabilityMicrobial Metabolic Engineering and Bioproduction
• Data science in cell imaging
  openalex 2021 置信度 0.70 Cell Image Analysis TechniquesGenetics, Bioinformatics, and Biomedical ResearchSingle-cell and spatial transcriptomics
• High-dimensional gene expression and morphology profiles of cells across 28,000 genetic and chemical perturbations
  openalex 2022 置信度 0.70 Cell Image Analysis TechniquesSingle-cell and spatial transcriptomicsGene expression and cancer classification
• Biological function in the twilight zone of sequence conservation
  openalex 2017 置信度 0.70 Genetic diversity and population structureGenomics and Phylogenetic StudiesChromosomal and Genetic Variations
• Image-based multivariate profiling of drug responses from single cells
  openalex 2007 置信度 0.70 Cell Image Analysis TechniquesSingle-cell and spatial transcriptomicsAdvanced Fluorescence Microscopy Techniques
• WGSA: an annotation pipeline for human genome sequencing studies
  openalex 2015 置信度 0.70 Genomics and Rare DiseasesGenomics and Phylogenetic StudiesRNA modifications and cancer
• Computation for ChIP-seq and RNA-seq studies
  openalex 2009 置信度 0.70 RNA modifications and cancerGenomics and Phylogenetic StudiesRNA Research and Splicing
• JUMP Cell Painting dataset: morphological impact of 136,000 chemical and genetic perturbations
  openalex 2023 置信度 0.70 Cell Image Analysis TechniquesSingle-cell and spatial transcriptomics3D Printing in Biomedical Research
• Multi-omics integration in biomedical research – A metabolomics-centric review
  openalex 2020 置信度 0.70 Bioinformatics and Genomic NetworksMetabolomics and Mass Spectrometry StudiesMicrobial Metabolic Engineering and Bioproduction
• A deoxyribozyme-based molecular automaton
  openalex 2003 置信度 0.70 Protein Structure and DynamicsReceptor Mechanisms and SignalingProtein Degradation and Inhibitors
• Advances in single-cell omics and multiomics for high-resolution molecular profiling
  openalex 2024 置信度 0.70 Single-cell and spatial transcriptomicsGene expression and cancer classificationGene Regulatory Network Analysis
• Secondary structure prediction: combination of three different methods
  openalex 1988 置信度 0.70 Chemical Synthesis and AnalysisRNA and protein synthesis mechanismsComputational Drug Discovery Methods
• Harvest scheduling algorithm to equalize supplier benefits: A case study from the Thai sugar cane industry
  openalex 2014 置信度 0.70 Sugarcane Cultivation and ProcessingNatural Products and Biological ResearchBiofuel production and bioconversion
• HelixFold: An Efficient Implementation of AlphaFold2 using PaddlePaddle
  openalex 2022 置信度 0.70 Machine Learning in BioinformaticsProtein Structure and DynamicsEnzyme Structure and Function
• Cutadapt removes adapter sequences from high-throughput sequencing reads
  openalex 2011 置信度 0.70 Genomics and Phylogenetic StudiesRNA modifications and cancerRNA and protein synthesis mechanisms
• chimeraviz: a tool for visualizing chimeric RNA
  openalex 2017 置信度 0.70 Genomics and Phylogenetic StudiesRNA Research and SplicingRNA and protein synthesis mechanisms
• PxBLAT: an efficient python binding library for BLAT
  openalex 2024 置信度 0.70 Genomics and Phylogenetic StudiesScientific Computing and Data ManagementGenetics, Bioinformatics, and Biomedical Research
• Identification of Morphological Biosignatures in Martian Analogue Field Specimens Using In Situ Planetary Instrumentation
  openalex 2008 置信度 0.70 Planetary Science and ExplorationSpaceflight effects on biologySpace Exploration and Technology
• Scaling Up Digital Circuit Computation with DNA Strand Displacement Cascades
  openalex 2011 置信度 0.70 DNA and Biological ComputingAdvanced biosensing and bioanalysis techniquesDNA and Nucleic Acid Chemistry
• Principles of genetic circuit design
  openalex 2014 置信度 0.70 CRISPR and Genetic EngineeringGene Regulatory Network AnalysisAdvanced biosensing and bioanalysis techniques