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• Computational DNA Droplets Recognizing miRNA Sequence Inputs Based on Liquid–Liquid Phase Separation
  openalex 2022 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingModular Robots and Swarm Intelligence
• Aptamer Selection Technology and Recent Advances
  openalex 2015 置信度 0.70 Advanced biosensing and bioanalysis techniquesRNA Interference and Gene DeliveryBiosensors and Analytical Detection
• ViennaRNA Package 2.0
  openalex 2011 置信度 0.70 RNA and protein synthesis mechanismsOrigins and Evolution of LifeDNA and Nucleic Acid Chemistry
• Algorithmic Self-Assembly of DNA Sierpinski Triangles
  openalex 2004 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingModular Robots and Swarm Intelligence
• DNA-based matching of digital signals
  openalex 2004 置信度 0.70 DNA and Biological ComputingAdvanced biosensing and bioanalysis techniquesDNA and Nucleic Acid Chemistry
• SciPy 1.0: fundamental algorithms for scientific computing in Python
  openalex 2020 置信度 0.70 Computational Physics and Python ApplicationsScientific Computing and Data ManagementGenetics, Bioinformatics, and Biomedical Research
• The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
  openalex 2022 置信度 0.70 Scientific Computing and Data ManagementGenetics, Bioinformatics, and Biomedical ResearchResearch Data Management Practices
• HTSeq—a Python framework to work with high-throughput sequencing data
  openalex 2014 置信度 0.70 Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsGenomics and Rare Diseases
• ranger : A Fast Implementation of Random Forests for High Dimensional Data in C++ and R
  openalex 2017 置信度 0.70 Genetic Associations and EpidemiologyGene expression and cancer classificationStatistical Methods and Inference
• Fast gapped-read alignment with Bowtie 2
  openalex 2012 置信度 0.70 Genomics and Phylogenetic StudiesAlgorithms and Data CompressionRNA and protein synthesis mechanisms
• Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments
  openalex 2016 置信度 0.70 Genomics and Phylogenetic StudiesGenomics and Chromatin DynamicsRNA and protein synthesis mechanisms
• Simple Neurite Tracer: open source software for reconstruction, visualization and analysis of neuronal processes
  openalex 2011 置信度 0.70 Cell Image Analysis TechniquesAdvanced Fluorescence Microscopy TechniquesAdvanced Electron Microscopy Techniques and Applications
• Software tools for automated transmission electron microscopy
  openalex 2019 置信度 0.70 Advanced Electron Microscopy Techniques and ApplicationsCell Image Analysis TechniquesAdvanced Fluorescence Microscopy Techniques
• Scripting-customised microscopy tools for Digital Micrograph™
  openalex 2005 置信度 0.70 Advanced Electron Microscopy Techniques and ApplicationsCell Image Analysis TechniquesAdvanced Data Storage Technologies
• Self-replication of complementary nucleotide-based oligomers
  openalex 1994 置信度 0.70 Origins and Evolution of LifeRNA and protein synthesis mechanismsDNA and Biological Computing
• Selective amplification by auto- and cross-catalysis in a replicating peptide system
  openalex 1998 置信度 0.70 Origins and Evolution of LifeChemical Synthesis and AnalysisDNA and Biological Computing
• Advances in Protein-Based Resistive Switching Memory: Fundamentals, Challenges, and Applications
  openalex 2025 置信度 0.70 Advanced Memory and Neural ComputingNeuroscience and Neural EngineeringAdvanced biosensing and bioanalysis techniques
• VMD: Visual molecular dynamics
  openalex 1996 置信度 0.70 Protein Structure and DynamicsMicrotubule and mitosis dynamicsEnzyme Structure and Function
• UCSF ChimeraX : Structure visualization for researchers, educators, and developers
  openalex 2020 置信度 0.70 Cell Image Analysis TechniquesScientific Computing and Data ManagementAdvanced Electron Microscopy Techniques and Applications
• MOTION – A Framework for Mixed-Protocol Multi-Party Computation
  openalex 2022 置信度 0.70 Cryptography and Data SecurityDNA and Biological ComputingDistributed systems and fault tolerance
• A method for obtaining digital signatures and public-key cryptosystems
  openalex 1978 置信度 0.70 Cryptography and Data SecurityChaos-based Image/Signal EncryptionDNA and Biological Computing
• Almost-optimal computational-basis-state transpositions
  openalex 2024 置信度 0.70 DNA and Biological ComputingQuantum Computing Algorithms and ArchitectureCellular Automata and Applications
• DNA nanomachines
  openalex 2007 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingDNA and Nucleic Acid Chemistry
• Integrated computer-aided engineering and design for DNA assemblies
  openalex 2021 置信度 0.70 Advanced biosensing and bioanalysis techniquesBacteriophages and microbial interactionsRNA Interference and Gene Delivery
• Logical computation using algorithmic self-assembly of DNA triple-crossover molecules
  openalex 2000 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingModular Robots and Swarm Intelligence
• DNA Logic Gates
  openalex 2004 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingDNA and Nucleic Acid Chemistry
• High-efficiency and integrable DNA arithmetic and logic system based on strand displacement synthesis
  openalex 2019 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingDNA and Nucleic Acid Chemistry
• Solving the SAT problem using a DNA computing algorithm based on ligase chain reaction
  openalex 2007 置信度 0.70 DNA and Biological ComputingAdvanced biosensing and bioanalysis techniquesModular Robots and Swarm Intelligence
• DNA computing: implementation of data flow logical operations
  openalex 2001 置信度 0.70 DNA and Biological ComputingAdvanced biosensing and bioanalysis techniquesModular Robots and Swarm Intelligence
• Biochemical Logic Circuits Based on DNA Combinatorial Displacement
  openalex 2020 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingDNA and Nucleic Acid Chemistry
• Solving mazes with single-molecule DNA navigators
  openalex 2018 置信度 0.70 Advanced biosensing and bioanalysis techniquesRNA Interference and Gene DeliveryPlasmonic and Surface Plasmon Research
• Fast and compact DNA logic circuits based on single-stranded gates using strand-displacing polymerase
  openalex 2019 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingBiosensors and Analytical Detection
• Renewable Time‐Responsive DNA Circuits
  openalex 2018 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingDNA and Nucleic Acid Chemistry
• DNA multi-bit non-volatile memory and bit-shifting operations using addressable electrode arrays and electric field-induced hybridization
  openalex 2018 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingModular Robots and Swarm Intelligence
• Design and Analysis of Compact DNA Strand Displacement Circuits for Analog Computation Using Autocatalytic Amplifiers
  openalex 2017 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingQuantum-Dot Cellular Automata
• Scale-up of industrial microbial processes
  openalex 2018 置信度 0.70 Viral Infectious Diseases and Gene Expression in InsectsMicrobial Metabolic Engineering and BioproductionMineral Processing and Grinding
• Industrial internet of things: What does it mean for the bioprocess industries?
  openalex 2023 置信度 0.70 Viral Infectious Diseases and Gene Expression in InsectsFault Detection and Control SystemsMineral Processing and Grinding
• Rapid prototyping of arbitrary 2D and 3D wireframe DNA origami
  openalex 2021 置信度 0.70 Advanced biosensing and bioanalysis techniquesRNA Interference and Gene DeliveryBacteriophages and microbial interactions
• AliView: a fast and lightweight alignment viewer and editor for large datasets
  openalex 2014 置信度 0.70 Genomics and Phylogenetic StudiesGenetics, Bioinformatics, and Biomedical ResearchScientific Computing and Data Management
• Electric fields unlock a transient vulnerability window for vancomycin-based treatment of staphylococcal biofilms
  openalex 2025 置信度 0.70 Planarian Biology and ElectrostimulationBacterial biofilms and quorum sensingMicrobial Inactivation Methods
• A Review of Wearable Electroceutical Devices for Chronic Wound Healing
  openalex 2025 置信度 0.70 Planarian Biology and ElectrostimulationAdvanced Sensor and Energy Harvesting MaterialsWound Healing and Treatments
• Advances in Physarum Machines: Sensing and Computing with Slime Mould
  openalex 2016 置信度 0.70 Slime Mold and Myxomycetes ResearchDiatoms and Algae ResearchPlant and Biological Electrophysiology Studies
• Passive vs Active Approaches in Particle Approximations of Reaction-Diffusion Computing
  openalex 2009 置信度 0.70 Slime Mold and Myxomycetes ResearchModular Robots and Swarm IntelligencePlant and Biological Electrophysiology Studies
• ROAD PLANNING WITH SLIME MOULD: IF PHYSARUM BUILT MOTORWAYS IT WOULD ROUTE M6/M74 THROUGH NEWCASTLE
  openalex 2010 置信度 0.70 Slime Mold and Myxomycetes ResearchDNA and Biological ComputingCellular Automata and Applications
• CGAL Arrangements and Their Applications: A Step-by-Step Guide
  openalex 2012 置信度 0.70 Computational Geometry and Mesh Generation3D Modeling in Geospatial ApplicationsGenome Rearrangement Algorithms
• Scalable molecular dynamics on CPU and GPU architectures with NAMD
  openalex 2020 置信度 0.70 Protein Structure and DynamicsAdvanced NMR Techniques and ApplicationsNanopore and Nanochannel Transport Studies
• Accelerating molecular dynamics simulations using Graphics Processing Units with CUDA
  openalex 2008 置信度 0.70 Parallel Computing and Optimization TechniquesProtein Structure and DynamicsDistributed and Parallel Computing Systems
• Twelve years of SAMtools and BCFtools
  openalex 2021 置信度 0.70 Genetic Mapping and Diversity in Plants and AnimalsGenomics and Phylogenetic StudiesGene expression and cancer classification
• GROMACS: A message-passing parallel molecular dynamics implementation
  openalex 1995 置信度 0.70 Protein Structure and DynamicsSpectroscopy and Quantum Chemical StudiesAdvanced Chemical Physics Studies
• DNA rendering of polyhedral meshes at the nanoscale
  openalex 2015 置信度 0.70 Advanced biosensing and bioanalysis techniquesRNA Interference and Gene DeliveryDNA and Nucleic Acid Chemistry
• DNA Origami Design of Dolphin-Shaped Structures with Flexible Tails
  openalex 2008 置信度 0.70 Advanced biosensing and bioanalysis techniquesRNA Interference and Gene DeliveryBacteriophages and microbial interactions
• Controlled assembly of dendrimer-like DNA
  openalex 2003 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingBacteriophages and microbial interactions
• Visual DSD: a design and analysis tool for DNA strand displacement systems
  openalex 2011 置信度 0.70 DNA and Nucleic Acid ChemistryAdvanced biosensing and bioanalysis techniquesRNA Interference and Gene Delivery
• Using lateral capillary forces to compute by self-assembly
  openalex 2000 置信度 0.70 DNA and Biological ComputingAdvanced biosensing and bioanalysis techniquesModular Robots and Swarm Intelligence
• Computing exponentially faster: implementing a non-deterministic universal Turing machine using DNA
  openalex 2017 置信度 0.70 DNA and Biological ComputingAdvanced biosensing and bioanalysis techniquesAlgorithms and Data Compression
• Construction of DNA-based logic gates on nanostructured microelectrodes
  openalex 2017 置信度 0.70 Advanced biosensing and bioanalysis techniquesDNA and Biological ComputingBiosensors and Analytical Detection
• A variance-stabilizing transformation for gene-expression microarray data
  openalex 2002 置信度 0.70 Gene expression and cancer classificationStatistical Methods and InferenceBayesian Methods and Mixture Models
• Comparison of Methods for Image-Based Profiling of Cellular Morphological Responses to Small-Molecule Treatment
  openalex 2013 置信度 0.70 Cell Image Analysis TechniquesAdvanced Fluorescence Microscopy TechniquesImage Processing Techniques and Applications
• The Reactome Pathway Knowledgebase 2024
  openalex 2023 置信度 0.70 Genetics, Bioinformatics, and Biomedical ResearchScientific Computing and Data ManagementAdvanced Proteomics Techniques and Applications
• A statistical framework for high-content phenotypic profiling using cellular feature distributions
  openalex 2022 置信度 0.70 Cell Image Analysis TechniquesImage Processing Techniques and Applications
• Capturing single-cell heterogeneity via data fusion improves image-based profiling
  openalex 2019 置信度 0.70 Cell Image Analysis TechniquesImage Processing Techniques and ApplicationsSingle-cell and spatial transcriptomics
• Alternate dyes for image-based profiling assays
  openalex 2025 置信度 0.70 Cell Image Analysis TechniquesAdvanced Fluorescence Microscopy TechniquesCellular Mechanics and Interactions
• The PRIDE database at 20 years: 2025 update
  openalex 2024 置信度 0.70 Research Data Management PracticesScientific Computing and Data ManagementGenetics, Bioinformatics, and Biomedical Research
• Reproducibility in systems biology modelling
  openalex 2021 置信度 0.70 Gene Regulatory Network AnalysisBioinformatics and Genomic NetworksScientific Computing and Data Management
• Cluster Validation by Prediction Strength
  openalex 2005 置信度 0.70 Bayesian Methods and Mixture ModelsGene expression and cancer classificationAdvanced Clustering Algorithms Research
• Phenotype clustering in health care: A narrative review for clinicians
  openalex 2022 置信度 0.70 Gene expression and cancer classificationBioinformatics and Genomic NetworksBiomedical Text Mining and Ontologies
• Low full-cell voltage driven high-current-density selective paired formate electrosynthesis
  openalex 2021 置信度 0.70 Electrocatalysts for Energy ConversionAdvanced Memory and Neural ComputingSemiconductor materials and devices
• Free energy minimisation algorithmfor decoding and cryptanalysis
  openalex 1995 置信度 0.70 Coding theory and cryptographyDNA and Biological ComputingCryptographic Implementations and Security
• Open-source image reconstruction of super-resolution structured illumination microscopy data in ImageJ
  openalex 2016 置信度 0.70 Advanced Fluorescence Microscopy TechniquesCell Image Analysis TechniquesPhotoacoustic and Ultrasonic Imaging
• The evolution of complexity without natural selection, a possible large-scale trend of the fourth kind
  openalex 2005 置信度 0.70 Evolution and Paleontology StudiesPaleontology and Evolutionary BiologyPhilosophy and History of Science
• Shaping 3D Root System Architecture
  openalex 2017 置信度 0.70 Plant nutrient uptake and metabolismAdvanced Data Storage TechnologiesParallel Computing and Optimization Techniques
• Why do we need hubs?
  openalex 2008 置信度 0.70 Distributed and Parallel Computing Systems
• The quadruplex and the vase
  openalex 1992 置信度 0.70 DNA and Nucleic Acid ChemistryAdvanced biosensing and bioanalysis techniquesDNA and Biological Computing
• Stepping into the omics era: Opportunities and challenges for biomaterials science and engineering
  openalex 2016 置信度 0.70 Machine Learning in Materials ScienceGene expression and cancer classificationGene Regulatory Network Analysis
• Smart Bioinks for the Printing of Human Tissue Models
  openalex 2022 置信度 0.70 3D Printing in Biomedical ResearchInnovative Microfluidic and Catalytic Techniques InnovationCell Image Analysis Techniques
• Testing Algorithms for Hard to Detect Thermal Crosstalk Induced Write Disturb Faults in Phase Change Memories
  openalex 2024 置信度 0.70 VLSI and Analog Circuit TestingSilicon and Solar Cell TechnologiesIterative Learning Control Systems
• Toward robust integrated circuits: The embryonics approach
  openalex 2000 置信度 0.70 DNA and Biological ComputingModular Robots and Swarm IntelligenceCellular Automata and Applications
• Self-replicating loop with universal construction
  openalex 2004 置信度 0.70 Cellular Automata and ApplicationsModular Robots and Swarm IntelligenceDNA and Biological Computing
• Embryonic Machines That Divide and Differentiate
  openalex 2004 置信度 0.70 Cellular Automata and ApplicationsModular Robots and Swarm IntelligenceDNA and Biological Computing
• Study of Multilevel Programming in Programmable Metallization Cell (PMC) Memory
  openalex 2009 置信度 0.70 Advanced Memory and Neural ComputingSemiconductor materials and devicesPhase-change materials and chalcogenides
• Cryptanalyzing an image cipher using multiple chaos and DNA operations
  openalex 2023 置信度 0.70 Chaos-based Image/Signal EncryptionFractal and DNA sequence analysisDNA and Biological Computing
• An image encryption scheme based on an optimal chaotic map derived by multi-objective optimization using ABC algorithm
  openalex 2021 置信度 0.70 Chaos-based Image/Signal EncryptionCoding theory and cryptographyDNA and Biological Computing
• Algorithm for DNA sequence assembly by quantum annealing
  openalex 2022 置信度 0.70 Genomics and Phylogenetic StudiesDNA and Biological ComputingFractal and DNA sequence analysis
• GROMACS: Fast, flexible, and free
  openalex 2005 置信度 0.70 Spectroscopy and Quantum Chemical StudiesProtein Structure and DynamicsAdvanced Chemical Physics Studies
• Overview of the CCP 4 suite and current developments
  openalex 2011 置信度 0.70 Enzyme Structure and FunctionProtein Structure and DynamicsComputational Drug Discovery Methods
• The integration of macromolecular diffraction data
  openalex 2005 置信度 0.70 Enzyme Structure and FunctionProtein Structure and DynamicsComputational Drug Discovery Methods
• The CCP 4 suite: integrative software for macromolecular crystallography
  openalex 2023 置信度 0.70 Enzyme Structure and FunctionProtein Structure and DynamicsAdvanced Electron Microscopy Techniques and Applications
• AmberTools
  openalex 2023 置信度 0.70 Protein Structure and DynamicsScientific Computing and Data ManagementMetabolomics and Mass Spectrometry Studies
• An autonomous molecular computer for logical control of gene expression
  openalex 2004 置信度 0.90 DNA and Biological ComputingAdvanced biosensing and bioanalysis techniquesRNA and protein synthesis mechanisms
• Bioconductor: open software development for computational biology and bioinformatics
  openalex 2004 置信度 0.90 Scientific Computing and Data ManagementGenetics, Bioinformatics, and Biomedical ResearchSingle-cell and spatial transcriptomics
• A multiple minima genetic algorithm for protein structure prediction
  openalex 2013 置信度 0.90 Protein Structure and DynamicsEnzyme Structure and FunctionMachine Learning in Bioinformatics
• Protein folding optimization based on 3D off-lattice model via an improved artificial bee colony algorithm
  openalex 2015 置信度 0.90 Protein Structure and DynamicsAlgorithms and Data CompressionBiofuel production and bioconversion
• A balance-evolution artificial bee colony algorithm for protein structure optimization based on a three-dimensional AB off-lattice model
  openalex 2014 置信度 0.90 Protein Structure and DynamicsComputational Drug Discovery MethodsMachine Learning in Bioinformatics
• MO4: A Many-Objective Evolutionary Algorithm for Protein Structure Prediction
  openalex 2021 置信度 0.90 Advanced Multi-Objective Optimization AlgorithmsProtein Structure and DynamicsEvolutionary Algorithms and Applications
• GO::TermFinder—open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes
  openalex 2004 置信度 0.90 Bioinformatics and Genomic NetworksGene expression and cancer classificationBiomedical Text Mining and Ontologies
• An Enhanced Genetic Algorithm for Ab Initio Protein Structure Prediction
  openalex 2015 置信度 0.90 Protein Structure and DynamicsMachine Learning in BioinformaticsGlycosylation and Glycoproteins Research
• Improved hybrid optimization algorithm for 3D protein structure prediction
  openalex 2014 置信度 0.90 Protein Structure and DynamicsMachine Learning in BioinformaticsRNA and protein synthesis mechanisms
• Protein secondary structure optimization using an improved artificial bee colony algorithm based on AB off-lattice model
  openalex 2013 置信度 0.90 Machine Learning in BioinformaticsProtein Structure and DynamicsMetaheuristic Optimization Algorithms Research
• EMBOSS: The European Molecular Biology Open Software Suite
  openalex 2000 置信度 0.90 Bioinformatics and Genomic NetworksGenomics and Phylogenetic StudiesGene expression and cancer classification
• A multi-objective butterfly optimization algorithm for protein encoding
  openalex 2023 置信度 0.90 RNA and protein synthesis mechanismsMonoclonal and Polyclonal Antibodies Researchvaccines and immunoinformatics approaches