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populations and evolution

GeneTech 知识引擎共收录 84 篇相关科研实体，横跨 11 个垂直领域。数据来自 OpenAlex、arXiv、Crossref、PubMed、Europe PMC 等公开学术源，全部可溯源到原文。

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代表性文献（按质量分排序，前 60 条）

• Evo-SETI: A Mathematical Tool for Cladistics, Evolution, and SETI
  2021 · 地外科学 · The discovery of new exoplanets makes us wonder where each new exoplanet stands along its way to develop life as we know it on Earth. Our Evo-SETI Theory is a mathematical way to face this problem. We describe cladistics…
• A brief review of evolutionary game dynamics in the reinforcement learning paradigm
  2026 · AI 安全与对齐 · Cooperation, fairness, trust, and resource coordination are cornerstones of modern civilization, yet their emergence remains inadequately explained by the persistent discrepancies between theoretical predictions and beha…
• Life as Plasmas: Autonomy and Interactivism in-materio
  2026 · 地外科学 · When is a material system a candidate for life at all? We argue that this question is prior to behavior, functional architecture, or computational capacity, and that at root it is one of physical admissibility. We develo…
• Deep-time consistency in proteome elemental composition across cellular and viral life
  2026 · 生命科学 · Proteins are constructed from a limited alphabet of ~20 amino acids, yet the origins and selection of this specific alphabet are unresolved. One largely overlooked aspect is whether elemental composition constrains the r…
• Ecosystems as adaptive living circuits
  2025 · 生物计算 · Unlike many physical nonequilibrium systems, in biological systems, the coupling to external energy sources is not a fixed parameter but adaptively controlled by the system itself. We do not have theoretical frameworks t…
• Life on the Edge: Using Planetary Context to Enhance Biosignatures and Avoid False Positives
  2025 · 地外科学 · We use a probability theory framework to discuss the search for biosignatures. This perspective allows us to analyse the potential for different biosignatures to provide convincing evidence of extraterrestrial life and t…
• A Human-Vector Susceptible-Infected-Susceptible Model for Analyzing and Controlling the Spread of Vector-Borne Diseases
  2025 · 低空经济 · We propose an epidemic model for the spread of vector-borne diseases. The model, which is built extending the classical susceptible-infected-susceptible model, accounts for two populations -- humans and vectors -- and fo…
• A Quantum Approach for Optimal Transient Control in Network-Based Epidemic Models
  2025 · 量子计算 · Effective epidemic control is crucial for mitigating the spread of infectious diseases, particularly when pharmaceutical interventions such as vaccines or treatments are limited. Non-pharmaceutical strategies, including …
• Describing the Persistence Landscape for Introducing Microbes into Complex Communities
  2025 · 合成生物与生物制造 · The introduction of non-native organisms into complex microbiome communities holds enormous potential to benefit society. However, microbiome engineering faces several challenges including successful establishment of the…
• Inverse problems for coupled nonlocal nonlinear systems arising in mathematical biology
  2024 · 生物计算 · In this paper, we propose and study several inverse problems of determining unknown parameters in nonlocal nonlinear coupled PDE systems, including the potentials, nonlinear interaction functions and time-fractional orde…
• Inverse problems for coupled nonlocal nonlinear systems arising in mathematical biology
  2024 · 合成生物与生物制造 · In this paper, we propose and study several inverse problems of determining unknown parameters in nonlocal nonlinear coupled PDE systems, including the potentials, nonlinear interaction functions and time-fractional orde…
• The Core & Periphery Hypothesis: A Conceptual Basis for Generality in Cell and Developmental Biology
  2023 · 合成生物与生物制造 · The discovery of general principles underlying the complexity and diversity of cellular and developmental systems is a central and long-standing aim of biology. Whilst new technologies collect data at an ever-acceleratin…
• Origin of life from a maker's perspective -- focus on protocellular compartments in bottom-up synthetic biology
  2022 · 生物计算 · The origin of life is shrouded in mystery, with few surviving clues, obscured by evolutionary competition. Previous reviews have touched on the complementary approaches of top-down and bottom-up synthetic biology to augm…
• Predicting biosignatures for nutrient limited biospheres
  2022 · 地外科学 · With the characterisations of potentially habitable planetary atmospheres on the horizon, the search for biosignatures is set to become a major area of research in the coming decades. To understand the atmospheric charac…
• Origin of life from a maker's perspective -- focus on protocellular compartments in bottom-up synthetic biology
  2022 · 合成生物与生物制造 · The origin of life is shrouded in mystery, with few surviving clues, obscured by evolutionary competition. Previous reviews have touched on the complementary approaches of top-down and bottom-up synthetic biology to augm…
• An Agnostic Biosignature Based on Modeling Panspermia and Terraforming
  2024 · 地外科学 · The search for a second instance of life is one of the greatest problems of modern science. Outside of creating an artificial origin of life on Earth, the primary targets for the search for life are planets inside or out…
• Information Transmission via Molecular Communication in Astrobiological Environments
  2023 · 地外矿物 · The ubiquity of information transmission via molecular communication between cells is comprehensively documented on Earth; this phenomenon might even have played a vital role in the origin(s) and early evolution of life.…
• Information Transmission via Molecular Communication in Astrobiological Environments
  2023 · 地外科学 · The ubiquity of information transmission via molecular communication between cells is comprehensively documented on Earth; this phenomenon might even have played a vital role in the origin(s) and early evolution of life.…
• Genomic regulatory architecture of human embryo retroviral LTR elements affecting evolution, development, and pathophysiology of Modern Humans
  2023 · 生命科学 · Two distinct families of pan-primate endogenous retroviruses, namely HERVL and HERVH, infected primates germline, colonized host genomes, and evolved into the global retroviral genomic regulatory dominion (GRD) operating…
• Muon Radiation Dose and Marine Megafaunal Extinction at the end-Pliocene Supernova
  2017 · 地外科学 · Considerable data and analysis support the detection of one or more supernovae at a distance of about 50 pc, ~2.6 million years ago. This is possibly related to the extinction event around that time and is a member of a …
• Motility at the origin of life: Its characterization and a model
  2013 · 地外科学 · Due to recent advances in synthetic biology and artificial life, the origin of life is currently a hot topic of research. We review the literature and argue that the two traditionally competing "replicator-first" and "me…
• Monomer abundance distribution patterns as a universal biosignature: Examples from terrestrial and digital life
  2011 · 地外科学 · Organisms leave a distinctive chemical signature in their environment because they synthesize those molecules that maximize their fitness. As a result, the relative concentrations of related chemical monomers in life-bea…
• New high-tech flexible networks for the monitoring of deep-sea ecosystems
  2022 · 深海科技 · Increasing interest in the acquisition of biotic and abiotic resources from within the deep sea (e.g. fisheries, oil-gas extraction, and mining) urgently imposes the development of novel monitoring technologies, beyond t…
• Community Report from the Biosignatures Standards of Evidence Workshop
  2022 · 地外科学 · The search for life beyond the Earth is the overarching goal of the NASA Astrobiology Program, and it underpins the science of missions that explore the environments of Solar System planets and exoplanets. However, the d…
• Regulation of stem cell dynamics through volume exclusion
  2022 · 合成生物与生物制造 · Maintenance and regeneration of adult tissues rely on the self-renewal of stem cells. Regeneration without over-proliferation requires precise regulation of the stem cell proliferation and differentiation rates. The natu…
• A systems biology approach to COVID-19 progression in a population
  2020 · 生物计算 · A number of models in mathematical epidemiology have been developed to account for control measures such as vaccination or quarantine. However, COVID-19 has brought unprecedented social distancing measures, with a challe…
• Coloured noise time series as appropriate models for environmental variation in artificial evolutionary systems
  2020 · 边缘智能 · Ecological, environmental and geophysical time series consistently exhibit the characteristics of coloured (1/f^\b{eta}) noise. Here we briefly survey the literature on coloured noise, population persistence and related …
• The genomic architecture and evolutionary fates of supergenes
  2020 · 生命科学 · Supergenes are genomic regions containing sets of tightly linked loci that control multi-trait phenotypic polymorphisms under balancing selection. Recent advances in genomics have uncovered significant variation in both …
• Addressing Ancestry Disparities in Genomic Medicine: A Geographic-aware Algorithm
  2020 · 生命科学 · With declining sequencing costs a promising and affordable tool is emerging in cancer diagnostics: genomics. By using association studies, genomic variants that predispose patients to specific cancers can be identified, …
• A systems biology approach to COVID-19 progression in a population
  2020 · 合成生物与生物制造 · A number of models in mathematical epidemiology have been developed to account for control measures such as vaccination or quarantine. However, COVID-19 has brought unprecedented social distancing measures, with a challe…
• No evidence of systematic proximity ascertainment bias in early COVID-19 cases in Wuhan Reply to Weissman (2024)
  2024 · 地外矿物 · In a short text published as Letter to the Editor of the Journal of the Royal Statistical Society Series A, Weissman (2024) argues that the finding that early COVID-19 cases without an ascertained link to Wuhan's Huanan …
• Circuit design in biology and machine learning. I. Random networks and dimensional reduction
  2024 · 生物计算 · A biological circuit is a neural or biochemical cascade, taking inputs and producing outputs. How have biological circuits learned to solve environmental challenges over the history of life? The answer certainly follows …
• No evidence of systematic proximity ascertainment bias in early COVID-19 cases in Wuhan Reply to Weissman (2024)
  2024 · 量子计算 · In a short text published as Letter to the Editor of the Journal of the Royal Statistical Society Series A, Weissman (2024) argues that the finding that early COVID-19 cases without an ascertained link to Wuhan's Huanan …
• The Community Simulator: A Python package for microbial ecology
  2019 · 生物计算 · Natural microbial communities contain hundreds to thousands of interacting species. For this reason, computational simulations are playing an increasingly important role in microbial ecology. In this manuscript, we prese…
• An artifcial life approach to studying niche differentiation in soundscape ecology
  2019 · 地外科学 · Artificial life simulations are an important tool in the study of ecological phenomena that can be difficult to examine directly in natural environments. Recent work has established the soundscape as an ecologically impo…
• A Critical-like Collective State Leads to Long-range Cell Communication in Dictyostelium discoideum Aggregation
  2018 · 合成生物与生物制造 · The transition from single-cell to multicellular behavior is important in early development but rarely studied. The starvation-induced aggregation of the social amoeba Dictyostelium discoideum into a multicellular slug i…
• Relationship between metabolic and genomic diversity in sesame (Sesamum indicum L.)
  2014 · 生命科学 · Background: Diversity estimates in cultivated plants provide a rationale for conservation strategies and support the selection of starting material for breeding programs. Diversity measures applied to crops usually have …
• Quantifying evolutionary constraints on B cell affinity maturation
  2014 · 合成生物与生物制造 · The antibody repertoire of each individual is continuously updated by the evolutionary process of B cell receptor mutation and selection. It has recently become possible to gain detailed information concerning this proce…
• Representation of Dormant and Active Microbial Dynamics for Ecosystem Modeling
  2013 · 生物计算 · Dormancy is an essential strategy for microorganisms to cope with environmental stress. However, global ecosystem models typically ignore microbial dormancy, resulting in major model uncertainties. To facilitate the cons…
• Prominent effect of soil network heterogeneity on microbial invasion
  2012 · 生物计算 · Using a network representation for real soil samples and mathematical models for microbial spread, we show that the structural heterogeneity of the soil habitat may have a very significant influence on the size of microb…
• Population-expression models of immune response
  2012 · 生物计算 · The immune response to a pathogen has two basic features. The first is the expansion of a few pathogen-specific cells to form a population large enough to control the pathogen. The second is the process of differentiatio…
• Detection of selective sweeps in cattle using genome-wide SNP data
  2012 · 生命科学 · The domestication and subsequent selection by humans to create breeds of cattle undoubtedly altered the patterning of variation within their genomes. Strong selection to fix advantageous large-effect mutations underlying…
• Evolutionary genomics of transposable elements in Saccharomyces cerevisiae
  2012 · 生命科学 · Saccharomyces cerevisiae is one of the premier model systems for studying the genomics and evolution of transposable elements. The availability of the S. cerevisiae genome led to many insights into its five known transpo…
• Population genomics of the Wolbachia endosymbiont in Drosophila melanogaster
  2012 · 生命科学 · Wolbachia are maternally-inherited symbiotic bacteria commonly found in arthropods, which are able to manipulate the reproduction of their host in order to maximise their transmission. Here we use whole genome resequenci…
• Population-expression models of immune response
  2012 · 合成生物与生物制造 · The immune response to a pathogen has two basic features. The first is the expansion of a few pathogen-specific cells to form a population large enough to control the pathogen. The second is the process of differentiatio…
• Innovative in silico approaches to address avian flu using grid technology
  2008 · AI 驱动科学发现 · The recent years have seen the emergence of diseases which have spread very quickly all around the world either through human travels like SARS or animal migration like avian flu. Among the biggest challenges raised by i…
• Towards a core genome: pairwise similarity searches on interspecific genomic data
  2008 · 生命科学 · The phenomenon of gene conservation is an interesting evolutionary problem related to speciation and adaptation. Conserved genes are acted upon in evolution in a way that preserves their function despite other structural…
• Co-expression of statistically over-represented peptides in proteomes: a key to phylogeny ?
  2004 · 生命科学 · It is proposed that the co-expression of statistically significant motifs among the sequences of a proteome is a phylogenetic trait. From the co-expression matrix of such motifs in a group of prokaryotic proteomes a suit…
• The effects of stochasticity at the single-cell level and cell size control on the population growth
  2016 · 合成生物与生物制造 · Establishing a quantitative connection between the population growth rate and the generation times of single cells is a prerequisite for understanding evolutionary dynamics of microbes. However, existing theories fail to…
• Fruit flies and moduli: interactions between biology and mathematics
  2015 · 合成生物与生物制造 · Possibilities for using geometry and topology to analyze statistical problems in biology raise a host of novel questions in geometry, probability, algebra, and combinatorics that demonstrate the power of biology to influ…
• Information-theoretic considerations concerning the origin of life
  2014 · 地外科学 · Research investigating the origins of life usually focuses on exploring possible life-bearing chemistries in the pre-biotic Earth, or else on synthetic approaches. Little work has been done exploring fundamental issues c…
• Astrobiological Complexity with Probabilistic Cellular Automata
  2012 · 地外矿物 · Search for extraterrestrial life and intelligence constitutes one of the major endeavors in science, but has yet been quantitatively modeled only rarely and in a cursory and superficial fashion. We argue that probabilist…
• Astrobiological Complexity with Probabilistic Cellular Automata
  2012 · 地外科学 · Search for extraterrestrial life and intelligence constitutes one of the major endeavors in science, but has yet been quantitatively modeled only rarely and in a cursory and superficial fashion. We argue that probabilist…
• The contribution of statistical physics to evolutionary biology
  2011 · 合成生物与生物制造 · Evolutionary biology shares many concepts with statistical physics: both deal with populations, whether of molecules or organisms, and both seek to simplify evolution in very many dimensions. Often, methodologies have un…
• Whilst this Planet Has Gone Cycling On: What Role for Periodic Astronomical Phenomena in Large Scale Patterns in the History of Life?
  2009 · 生命科学 · One of the longstanding debates in the history of paleontology focuses on the issue of whether or not there have been long term cycles (operating over tens of millions of years) in biodiversity and extinction. Here we co…
• Evolutionary Catastrophes and the Goldilocks Problem
  2007 · 地外矿物 · One of the mainstays of the controversial "rare Earth" hypothesis is the "Goldilocks problem" regarding various parameters describing a habitable planet, partially involving the role of mass extinctions and other catastr…
• Evolutionary Catastrophes and the Goldilocks Problem
  2007 · 地外科学 · One of the mainstays of the controversial "rare Earth" hypothesis is the "Goldilocks problem" regarding various parameters describing a habitable planet, partially involving the role of mass extinctions and other catastr…
• Gauss-Vanicek Spectral Analysis of the Sepkoski Compendium: No New Life Cycles
  2006 · 生命科学 · New periods can emerge from data as a byproduct of incorrect processing or even the method applied. In one such recent instance, a new life cycle with a 62+-3 Myr period was reportedly found (about trend) in genus variat…
• Survival of the cheapest: How proteome cost minimization drives evolution
  2020 · 生命科学 · Darwin's theory of evolution emphasized that positive selection of functional proficiency provides the fitness that ultimately determines the structure of life, a view that has dominated biochemical thinking of enzymes a…
• Stability of fixed life histories to perturbation by rare diapause
  2018 · 地外科学 · We follow up on a companion work that considered growth rates of populations growing at different sites, with different randomly varying growth rates at each site, in the limit as migration between sites goes to 0. We ex…

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