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genomics

GeneTech 知识引擎共收录 1592 篇相关科研实体，横跨 30 个垂直领域。数据来自 OpenAlex、arXiv、Crossref、PubMed、Europe PMC 等公开学术源，全部可溯源到原文。

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代表性文献（按质量分排序，前 60 条）

• Establishment of an efficient and PAM-relaxed LbCas12a genome editing tool in plants.
  2026 · AI 驱动科学发现 · Cas12a is widely used in plant genome editing, but its targeting scope is constrained by stringent protospacer adjacent motif (PAM) requirements and variable activity across species, limiting its application at diverse g…
• OrthoGuide: A Database for Rooting Inference of Orthologous Genes.
  2026 · 生物计算 · Orthology provides a powerful framework for investigating the evolutionary history of biological systems, as genes within the same orthologous group typically share a common ancestry. By tracing their distribution across…
• Topographical data for delineation of agricultural management zones
  2026 · 智慧农业 · The aim of this study was to delineate management zones by using topographical data, and to investigate how these management zones relate to soil parameters and yield. Elevation, as well as soil and yield data, were samp…
• Data and code from: Association with dynamic habitats disrupts speciation and reduces the efficacy of purifying selection in flightless beetles
  2026 · 生物计算 · Association with temporally dynamic habitats has been proposed as a strong predictor of effective population size (Ne) and speciation rates, and thus also potentially of molecular evolution rates, but empirical insights …
• VU Bioinformatics/NGS Suite: GO Term Enrichment Bubble Plot Generator
  2026 · 生物计算 · VU Bioinformatics/NGS Suite: GO Term Enrichment Bubble Plot Generator What is this work about? This work is part of a research project that investigates the biological processes associated with genes identified through n…
• Data and code from: The Great Dividing Range as a driver of genetic divergence in a low-dispersing dragonfly
  2026 · 生物计算 · Across complex landscapes, genetic structure can arise through a combination of geographic, ecological, and historical processes. In mountain systems, isolation by distance (IBD), environment (IBE), and resistance (IBR) …
• EFFICIENCY OF LABOR OPERATIONS WHEN FEEDING MIXTURE ON FEEDING TABLES
  2025 · 智慧农业 · The article presents the results of the analysis of labor operations carried out in the process of mechanized distribution and feeding of feed mixtures in free housing of animals The article presents the results of the a…
• A review of AI-based radiogenomics in neurodegenerative disease
  2025 · AI 安全与对齐 · Neurodegenerative diseases are chronic, progressive conditions that cause irreversible damage to the nervous system, particularly in aging populations. Early diagnosis is a critical challenge, as these diseases often dev…
• Advances in Artificial Intelligence (AI) Models and Generative Algorithms Represent a New Paradigm for Genomics Research
  2025 · AI 安全与对齐 · Genomics has developed in step with progress in computing. As computational capabilities have grown, analyses have expanded from simple statistics to artificial intelligence (AI)-based approaches within genomics. The dec…
• Fourth generation gravity separation using the Reflux Classifier
  2025 · 地外矿物 · • Fourth generation Reflux Classifier investigated for the first time. • New fluidisation based on slow rotating rake to develop dense medium zone. • Step change increase in upgrade of tin achieved using a single stage s…
• Accelerating whole-genome alignment in the age of complete genome assemblies
  2024 · AI 安全与对齐 · Abstract Recent advancements in long-read sequencing and assembly methods have ushered in an era of high-quality genome assemblies. Modern assemblies commonly feature megabase-long sequences frequently spanning entire ch…
• TSTA: Thread and SIMD-Based Trapezoidal Pairwise/Multiple Sequence Alignment Method
  2024 · AI 安全与对齐 · Abstracts The rapid advancements in sequencing length necessitate the adoption of increasingly efficient sequence alignment algorithms. The Needleman-Wunsch method introduces the foundational dynamic programming (DP) mat…
• Cerebra: a computationally efficient framework for accurate protein structure prediction
  2024 · AI 驱动科学发现 · Update A newer Cerebra release with updated model checkpoints and the CAMEO 2025 test set is available at: Cerebra v2 model checkpoints and CAMEO 2025 test set | Zenodo Please use the new Zenodo record for the latest mod…
• Application of K-means clustering based on artificial intelligence in gene statistics of biological information engineering
  2024 · 生物计算 · In the field of bioinformatics, the algorithm of biological gene sequence has always been one of the hot problems in scientific research. With the combination of biology and artificial intelligence technology, genetic al…
• The Advancement and Application of the Single-Cell Transcriptome in Biological and Medical Research
  2024 · 生物计算 · Single-cell RNA sequencing technology (scRNA-seq) has been steadily developing since its inception in 2009. Unlike bulk RNA-seq, scRNA-seq identifies the heterogeneity of tissue cells and reveals gene expression changes …
• JCVI: A versatile toolkit for comparative genomics analysis
  2024 · 生物计算 · The life cycle of genome builds spans interlocking pillars of assembly, annotation, and comparative genomics to drive biological insights. While tools exist to address each pillar separately, there is a growing need for …
• Obtaining yield maps in orchards by tracking machine behavior
  2023 · 智慧农业 · In hand harvested citrus orchards, fruits are usually stored in big bags or containers in the fields until they are picked by a crane and loaded into a truck. Yield maps for this type of harvest are mostly based on geo-r…
• Basic Local Alignment Search Tool (Blast) and Multiple Sequence Alignment
  2023 · AI 安全与对齐 · This chapter look at the topic of pairwise sequence comparison by describing the Basic Local Alignment Search Tool (BLAST). It discusses multiple sequence alignment programs with an emphasis on the first popular program …
• DNA Methylation (DM) data format and DMtools for efficient DNA methylation data storage and analysis
  2023 · 生物计算 · Abstract DNA methylation is a critical epigenetic mechanism that plays a pivotal role in various biological processes. Currently, larger datasets from whole-genome bisulfite sequencing for DNA methylation pose challenges…
• Debate in a multi-agent system : multiparty argumentation protocols
  2026 · AI Agent 生态 · Débat dans un système multi-agents : protocoles d'argumentation multipartite Cette thèse concerne l’étude des débats argumentatifs entre plusieurs agents artificiels. Notre travail est motivé par les difficultés qui surg…
• Contribution to the modeling of technology transfer in green IT with multi-agent system
  2026 · AI Agent 生态 · Contributions à la modélisation avec un système multi agent du transfert technologique en Green IT Depuis 5 à 10 ans, les recherches sont nombreuses sur la réduction de l'énergie en l'informatique (principalement sur la …
• Contributions to Multi-agent System Control through Fixed-Time Distributed Optimization
  2026 · AI Agent 生态 · Contributions à la commande des systèmes multi-agents par optimisation distribuée à temps fixe Avec le développement de l'informatique distribuée et des réseaux à grande échelle au cours de la dernière décennie, l'optimi…
• An Empirical Study on the Acceptance Intention of AI Agent Commerce: Focusing on Positive and Negative AI Factors
  2026 · AI Agent 生态 · 최근 생성형 AI(Artificial Intelligence)의 확산으로, 소비자의 쇼핑 활동을 대신 수행하는 AI 에이전트 커머스가 새로운 상거래 형태로 부상하고 있다. AI 에이전트 커머스는 기존 검색엔진을 대체할 가능성을 지니는 동시에, 인간의 경제활동에서 준(準)대리 주체로서의 역할이 확대된다는 점에서 주목받고 있다. 특히 AI 에이전트가 탐색, 추천, 의사결정, 결제에 이르는 전 과…
• Contribution of ontology alignment to enterprise interoperability
  2026 · AI 安全与对齐 · Contribution à l'interopérabilité des entreprises par alignement d'ontologies Cette thèse propose l’utilisation de l’alignement d'ontologies pour contribuer à l'interopérabilité d’une fédération d’entreprises en se basan…
• Deep Neural Network Modeling of Electric Motors
  2026 · AI 安全与对齐 · Modélisation, contrôle et supervision de moteurs électriques par réseaux de neurones profonds Cette thèse traite de l’application des réseaux de neurones dans la résolution de problèmes liés aux moteurs électriques. Le c…
• Incorporating physical knowledge into deep neural network
  2026 · AI 安全与对齐 · Incorporation de connaissance physique dans des réseaux de neurones profonds Un processus physique est un phénomène marqué par des changements graduels à travers une série d'états successifs se produisant dans le monde p…
• Determinants of clonal-evolutionary mode at recurrence in diffuse glioma: a scoping review and protocol
  2026 · AI 驱动科学发现 · Determinants of clonal-evolutionary mode at recurrence in diffuse glioma: a scoping review — protocol (v1.0, 17 Aug 2026) Author/guarantor: Alexandru C. Stan, MD, PhD (ORCID 0000-0002-7463-0393), independent researcher. …
• Data from Coral Dark Gene analysis
  2026 · AI 驱动科学发现 · Results files from manuscript "Cosmopolitan Gene Families With Known Functions Are Hotspots for the Evolution of Novel Genes in Stony Corals" (Genome Biology and Evolution, Volume 18, Issue 4, April 2026, evag072, https:…
• Data from Coral Dark Gene analysis
  2026 · AI 驱动科学发现 · Results files from manuscript "Cosmopolitan Gene Families With Known Functions Are Hotspots for the Evolution of Novel Genes in Stony Corals" (Genome Biology and Evolution, Volume 18, Issue 4, April 2026, evag072, https:…
• Pangenome-scale annotation of mycobacteriophages for dissecting phage–host interactions based on a Sequence Clustering and Structural Homology analysis strategy
  2026 · AI 驱动科学发现 · This record contains data related to the article "Pangenome-scale annotation of mycobacteriophages for dissecting phage–host interactions based on a Sequence Clustering and Structural Homology analysis strategy." Supplem…
• Pangenome-scale annotation of mycobacteriophages for dissecting phage–host interactions based on a Sequence Clustering and Structural Homology analysis strategy
  2026 · AI 驱动科学发现 · This record contains data related to the article "Pangenome-scale annotation of mycobacteriophages for dissecting phage–host interactions based on a Sequence Clustering and Structural Homology analysis strategy." Supplem…
• Title: Bio-Information Quantum Algorithm
  2026 · AI 驱动科学发现 · This paper explores the potential of quantum algorithms to revolutionize bioinformatics, particularly in genomic analysis, protein structure prediction, and drug discovery. The core concept centers on leveraging the inhe…
• Title: Bio-Information Quantum Algorithm
  2026 · AI 驱动科学发现 · This paper explores the potential of quantum algorithms to revolutionize bioinformatics, particularly in genomic analysis, protein structure prediction, and drug discovery. The core concept centers on leveraging the inhe…
• Protective Use of Regolith for Planetary and Lunar Exploration (PURPLE)
  2026 · 地外矿物 · Utilisation protectrice du régolithe pour l'exploration planétaire et lunaire Ce travail étudie des solutions intégrées pour la construction des habitacles qui protégeront les astronautes des rayons cosmiques galactiques…
• The origins of biomolecular asymmetry : study of extraterrestrial matter by two-dimensional gas chromatography
  2026 · 地外矿物 · Les origines de l'asymétrie biomoléculaire : étude de la matière extraterrestre par chromatographie bidimensionnelle en phase gazeuse La définition de la "vie" n'a pas encore fait l'objet d'un consensus scientifique, mai…
• Geophysical study of meteorite impact structures
  2026 · 地外矿物 · Etude géophysique de structures d'impact météoritique Les cratères d'impact hypervéloces sont les structures morphologiques les plus abondantes à la surface des corps planétaires telluriques du système solaire, sauf sur …
• DNA data storage algorithms and synchronization
  2026 · 生物计算 · Algorithmes pour la synchronisation de données et leur stockage sur ADN 175 zettaoctets. C'est la capacité estimée pour pouvoir stocker les données numériques en 2025. Malgré le fait que des centres de données plus grand…
• v1.0.0: Source Code Archive for DOCS Data Storage Publication
  2026 · 生物计算 · Release Notes: This release contains the exact snapshot of the docs_paper_data_storage codebase used to generate the results and figures for the DOCS data storage manuscript. Overview: This repository contains the script…
• A Tool for Pair-Wise Alignment Algorithm
  2025 · AI 安全与对齐 · Bioinformatics is the application of computational techniques to the management and analysis of biological information. The relationship between a query sequence, commonly termed as probe and o he sequence, known as subj…
• Exploring elastic properties of molecular crystals with universal machine learning interatomic potentials
  2025 · AI 驱动科学发现 · We benchmarked existing and newly trained universal machine learning interatomic potentials for modelling molecular crystals, particularly their elastic properties. We found that potentials trained on the SPICE dataset p…
• Advancing precision oncology with AI-powered genomic analysis
  2025 · AI 驱动科学发现 · Multiomics data integration approaches offer a comprehensive functional understanding of biological systems, with significant applications in disease therapeutics. However, the quantitative integration of multiomics data…
• DNA Algorithmic Self-Assembly
  2025 · 生物计算 · Abstract Since Seeman proposed using DNA as a nanomaterial, DNA Tile and DNA origami technologies have been successively proposed, and DNA has realized the programmable assembly from two-dimensional patterns to three-dim…
• Introduction
  2025 · 生物计算 · Abstract Biological computation refers to the computation that uses biological macromolecules as data for information processing. Biological macromolecules mainly include DNA, RNA, and proteins, and consequently, biologi…
• DNA Coding Theory and Algorithms
  2025 · 生物计算 · Abstract DNA computing is an emerging computational model that has garnered significant attention due to its distinctive advantages at the molecular biological level. Since it was introduced by Adelman in 1994, this fiel…
• AgroGeoDB-Net: A DBSCAN-Guided Augmentation and Geometric-Similarity Regularised Framework for GNSS Field–Road Classification in Precision Agriculture
  2026 · 智慧农业 · Field–road classification, a fine-grained form of agricultural machinery operation-mode identification, aims to use Global Navigation Satellite System (GNSS) trajectory data to assign each trajectory point a semantic lab…
• Oncological drug discovery: AI meets structure-based computational research
  2022 · AI 驱动科学发现 · The integration of machine learning and structure-based methods has proven valuable in the past as a way to prioritize targets and compounds in early drug discovery. In oncological research, these methods can be highly b…
• Human scRNA-seq Alignment Pipeline Version 1.0 v1
  2024 · AI 安全与对齐 · The Morrisey and Basil Labs at the University of Pennsylvania use a specific protocol for scRNA-seq (single-cell RNA sequencing) alignment that involves the STARsolo tool (version 2.9.7a) to generate outputs comparable t…
• Prediction of Weak Alignment from Molecule Structure
  2024 · AI 安全与对齐 · Residual dipolar couplings arise from the preferential orientation of a molecule in the anisotropic environment of an alignment medium. The characteristics and degree of alignment, transmitted from the alignment medium t…
• Technical Implementation of DNA Data-Storage
  2024 · 生物计算 · Due to the yearly increasing data volume data a volume of over 284 zetabytes is forecast for 2027. It is a challenge concerning data management of this high amount of data managing long-term storage, rapid data retrieval…
• Protein Structure Prediction
  2023 · AI 驱动科学发现 · The primary resource for protein structure is PDB. This database stores the coordinates of protein structures that have been solved either using X-rays or NMR. There exists a huge literature on techniques for predicting …
• The prediction challenge
  2023 · AI 驱动科学发现 · Abstract Genome projects will soon be producing hundreds of kilobases of raw sequence a day. A major effort in biocomputing will be the analysis of sequence data in terms of functional and structural characterization. Ho…
• Informed Self-organization
  2023 · 生物计算 · Abstract This chapter is a brief, non-orthodox introduction into molecular biology. As the Nobel Laureate Sidney Brenner wrote: ‘Biology is essentially (very low energy) physics with computations’. The chapter shows how …
• Evolution as a Ratchet of Information
  2023 · 生物计算 · Abstract This chapter discusses how information can be measured in a biologically meaningful way. This is based on Kolmogorov’s complexity and the concept of mutual information. Next the chapter discusses how information…
• SeqForge Software and Supplementary Tables
  2025 · 生物计算 · The rapid increase in publicly available microbial and metagenomic data has created a growing demand for tools that can efficiently perform custom large-scale comparative searches and functional annotation. While BLAST+ …
• Processing of yield map data for delineating yield zones
  2024 · 智慧农业 · Yield maps reflect systematic and random sources of yield variation as well as numerous errors caused by the harvest and mapping procedures used. A general framework for processing of multiyear yield map data was develop…
• paar: Precision Agriculture Data Analysis
  2024 · 智慧农业 · Precision agriculture spatial data depuration and homogeneous zones (management zone) delineation. The package includes functions that performs protocols for data cleaning management zone delineation and zone comparison;…
• Work-in-Progress: Towards a First Biological Realization of Thermomolecular Communications
  2024 · 生物计算 · This work-in-progress paper introduces a novel concept for the practical realization of a first biological thermomolecular communications testbed using eukaryotic yeast cells as receiver. In particular, we sketch the ide…
• Improving yield mapping accuracy using remote sensing
  2019 · 智慧农业 · The objective of this work was to investigate the use of remotely sensed vegetation indices to improve the quality of yield maps. The method was applied to the yield data of twelve cornfields from the Data Intensive Farm…
• Performance Evaluation of AI Based Load Balancing Algorithm (Reinforcement Learning) with other load balancing algorithms in a JPPF Grid: E.coli Genome Sequence Alignment Problem
  2019 · AI 安全与对齐 · Recent development of computational analysis in the field of genomics and proteomics has necessitated the use of high performance computing architectures such as grid, cluster and parallel computing. In this paper an att…
• Advances in Protein Super-Secondary Structure Prediction and Application to Protein Structure Prediction
  2019 · AI 驱动科学发现 · Due to the advancement in various sequencing technologies, the gap between the number of protein sequences and the number of experimental protein structures is ever increasing. Community-wide initiatives like CASP have r…

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